Draws a polygon or a circumference around the center of the Biplot with a proportional radio at the longest distance of the genotype.
First, it is necessary to execute the AMMI function. It is only valid for the BIPLOT function but not for the TRIPLOT one.
AMMI.contour(model, distance, shape, ...)
Arguments
| model | Object |
|---|---|
| distance | Circumference radius >0 and <=1 |
| shape | Numerical, relating to the shape of the polygon outline. |
| ... | Parameters corresponding to the R lines function |
Value
Genotypes Genotypes within and outside the area.
distance Distance from genotype to origin (0,0)
Note
Complement graphics AMMI
See also
Examples
library(agricolae) # see AMMI. data(sinRepAmmi) Environment <- sinRepAmmi$ENV Genotype <- sinRepAmmi$GEN Yield <- sinRepAmmi$YLD REP <- 3 MSerror <- 93.24224 model<-AMMI(Environment, Genotype, REP, Yield, MSerror) plot(model)AMMI.contour(model,distance=0.7,shape=8,col="red",lwd=2,lty=5)#> #> Limit, radio: 2.303589 #> Genotype in: 41 #> Genotype out: 9 #>#> $`GENOTYPE IN` #> [1] "1" "10" "11" "12" "13" "15" "16" "17" "18" "19" "21" "22" "23" "24" "25" #> [16] "26" "27" "28" "29" "31" "32" "33" "35" "36" "37" "38" "39" "4" "40" "41" #> [31] "42" "43" "44" "45" "46" "47" "48" "49" "50" "6" "7" #> #> $`GENOTYPE OUT` #> [1] "14" "2" "20" "3" "30" "34" "5" "8" "9" #> #> $Distance #> distance #> 1 1.9514760 #> 10 1.5615217 #> 11 1.1769189 #> 12 1.5375472 #> 13 1.9695047 #> 14 2.4885468 #> 15 0.8082461 #> 16 1.2355245 #> 17 0.9642868 #> 18 1.7277735 #> 19 1.2444535 #> 2 2.5864575 #> 20 3.0107101 #> 21 1.3768422 #> 22 1.8787002 #> 23 1.6592957 #> 24 1.1502888 #> 25 0.9657643 #> 26 1.3664762 #> 27 0.9072038 #> 28 2.2600489 #> 29 1.9305338 #> 3 3.2908418 #> 30 3.2759033 #> 31 0.5189824 #> 32 2.0794344 #> 33 0.3602233 #> 34 2.3231291 #> 35 1.0042183 #> 36 0.2286455 #> 37 0.5177541 #> 38 1.0371016 #> 39 0.7436472 #> 4 0.7355002 #> 40 0.7130276 #> 41 1.4534899 #> 42 0.5117842 #> 43 1.3041322 #> 44 0.6452761 #> 45 1.2233650 #> 46 1.8981620 #> 47 1.5444075 #> 48 0.7955642 #> 49 2.1712610 #> 5 2.5288390 #> 50 0.8002928 #> 6 1.4282289 #> 7 1.0677117 #> 8 2.3695614 #> 9 3.1242502 #>
