Individual Regression for each Genotype in Genotypes by Environment Interaction (GEI)
stab_reg(.data, .y, .rep, .gen, .env) # S3 method for default stab_reg(.data, .y, .rep, .gen, .env)
Arguments
| .data | data.frame |
|---|---|
| .y | Response Variable |
| .rep | Replication Factor |
| .gen | Genotypes Factor |
| .env | Environment Factor |
Value
Additive ANOVA
References
Singh, R. K. and Chaudhary, B. D. (2004) Biometrical Methods in Quantitative Genetic Analysis. New Delhi: Kalyani.
Examples
data(ge_data) Yield.StabReg <- stab_reg( .data = ge_data , .y = Yield , .rep = Rep , .gen = Gen , .env = Env )#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.#> Warning: Unknown or uninitialised column: '(weights)'.#> Warning: Unknown or uninitialised column: '(offset)'.Yield.StabReg#> $StabIndvReg #> [38;5;246m# A tibble: 60 x 9[39m #> Gen Mean Slope LCI UCI R.Sqr RMSE SSE Delta #> [38;5;250m*[39m [3m[38;5;246m<fct>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m [3m[38;5;246m<dbl>[39m[23m #> [38;5;250m 1[39m 013BT034 [4m4[24m248. 0.954 0.460 1.45 0.680 324. [4m9[24m[4m4[24m[4m2[24m048. [4m4[24m[4m7[24m[4m1[24m024. #> [38;5;250m 2[39m 122557 [4m4[24m062. 1.52 1.13 1.90 0.898 253. [4m5[24m[4m7[24m[4m4[24m068. [4m2[24m[4m8[24m[4m7[24m034. #> [38;5;250m 3[39m 122559 [4m4[24m259. 0.983 0.301 1.67 0.542 447. 1[4m7[24m[4m9[24m[4m9[24m675. [4m8[24m[4m9[24m[4m9[24m838. #> [38;5;250m 4[39m 12B.2511 [4m4[24m414. 1.64 0.994 2.28 0.787 422. 1[4m6[24m[4m0[24m[4m0[24m984. [4m8[24m[4m0[24m[4m0[24m492. #> [38;5;250m 5[39m 12FJ26 [4m4[24m057. 0.703 0.107 1.30 0.442 391. 1[4m3[24m[4m7[24m[4m2[24m720. [4m6[24m[4m8[24m[4m6[24m360. #> [38;5;250m 6[39m 14B.1030 [4m3[24m995. 0.995 0.407 1.58 0.620 385. 1[4m3[24m[4m3[24m[4m6[24m946. [4m6[24m[4m6[24m[4m8[24m473. #> [38;5;250m 7[39m 14C036 [4m3[24m943. 0.615 -[31m0[39m[31m.[39m[31m143[39m 1.37 0.272 497. 2[4m2[24m[4m2[24m[4m0[24m530. 1[4m1[24m[4m1[24m[4m0[24m265. #> [38;5;250m 8[39m 14C040 [4m3[24m825. 0.909 0.297 1.52 0.557 401. 1[4m4[24m[4m4[24m[4m5[24m024. [4m7[24m[4m2[24m[4m2[24m512. #> [38;5;250m 9[39m 9496 [4m4[24m072. 1.02 0.513 1.53 0.698 332. [4m9[24m[4m9[24m[4m0[24m414. [4m4[24m[4m9[24m[4m5[24m207. #> [38;5;250m10[39m AUR0809 [4m3[24m792. 1.26 0.732 1.79 0.764 347. 1[4m0[24m[4m8[24m[4m3[24m957. [4m5[24m[4m4[24m[4m1[24m979. #> [38;5;246m# ... with 50 more rows[39m #> #> $MeanSlopePlot#>
