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Stability Distance in AMMI

Source: R/stab_dist.R
stab_dist.Rd

Stability Distance of Genotypes in Additive ANOVA for Genotypes by Environment Interaction (GEI) model

Usage

stab_dist(.data, .y, .rep, .gen, .env, .m = 2)

# Default S3 method
stab_dist(.data, .y, .rep, .gen, .env, .m = 2)

Arguments

.data

data.frame

.y

Response Variable

.rep

Replication Factor

.gen

Genotypes Factor

.env

Environment Factor

.m

No of PCs retained

Value

Stability Distance

Author

  1. Muhammad Yaseen (myaseen208@gmail.com)

  2. Kent M. Edkridge (keskridge1@unl.edu)

Examples

data(ge_data)
YieldDist <-
     stab_dist(
            .data = ge_data
          , .y    = Yield
          , .rep  = Rep
          , .gen  = Gen
          , .env  = Env
          , .m    = 2
      )
YieldDist
#> $stabDist
#> # A tibble: 60 × 6
#>    Gen       Mean  Dist rMean rDist YSIDist
#>    <fct>    <dbl> <dbl> <int> <int>   <int>
#>  1 013BT034 4248.  7.08    11    18      29
#>  2 122557   4062. 10.2     31    27      58
#>  3 122559   4259. 10.3     10    28      38
#>  4 12B.2511 4414. 20.3      4    58      62
#>  5 12FJ26   4057.  8.77    32    22      54
#>  6 14B.1030 3995. 12.6     37    38      75
#>  7 14C036   3943. 12.5     41    37      78
#>  8 14C040   3825. 13.9     53    42      95
#>  9 9496     4072.  4.91    30    10      40
#> 10 AUR0809  3792. 12.1     54    36      90
#> # ℹ 50 more rows
#>