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Plot Results from BayesAMMI Model

Source: R/plot.R
plot.BayesAMMI.Rd

Generates diagnostic and visualization plots for the BayesAMMI model.

Arguments

x

An object of class BayesAMMI containing results from a Bayesian AMMI analysis.

plot_selection

A numeric value (1 to 6) or "all" (default) specifying which plots to generate:

  • 1: Trace and histogram plots for \(\mu\).

  • 2: Trace and histogram plots for \(\sigma^2\).

  • 3: AMMI method biplot.

  • 4: Bayesian AMMI method biplot.

  • 5: All trace and histogram plots.

  • 6: All biplots.

  • "all": All available plots.

...

Additional arguments (not used).

Value

Generates ggplot objects and displays them sequentially.

Details

The function generates diagnostic and visualization plots based on the `plot_selection` argument.

Author

Muhammad Yaseen (myaseen208@gmail.com)

Examples

data(Maiz)
fm1 <- bayes_ammi(
    .data = Maiz
 ,  .y    = Yield
 ,  .gen  = Gen
 ,  .env  = Env
 ,  .rep  = Rep
 , .nIter = 20
)

plot(x = fm1, plot_selection = 1)

plot(x = fm1, plot_selection = 2)

plot(x = fm1, plot_selection = 3)

plot(x = fm1, plot_selection = 4)

plot(x = fm1, plot_selection = 5)

plot(x = fm1, plot_selection = 6)